Junction City
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- Faith Lutheran ChurchLutheraner · Bönehus · 920 West 6th Avenue
- Alvadore Christian ChurchBönehus · 27373 8th Street
- Bethany Church of FranklinBönehus · 92078 Territorial Highway
- Bowen ChurchBönehus
- Caldwell ChurchBönehus
- Chestnut Grove ChurchBönehus
- Christ's CenterBönehus · 530 W 7th Ave
- Doctors Fork ChurchBönehus
- Episcopal Church of the CovenantAnglikaner · Bönehus · 314 North Adams Street
- Faith ChapelBönehus
- Faith ChurchBönehus
- First Baptist ChurchBaptister · Bönehus
- First Christian ChurchBönehus
- First Presbyterian ChurchReformerta och presbyterianer · Kyrka
- First Southern Baptist ChurchBaptister · Kyrka
- Franklin Christian ChurchBönehus · 92072 Territorial Highway
- Friendship ChurchBönehus
- Highland Baptist ChurchBaptister · Kyrka · 1407 Saint Mary's Road
- Hope In Jesus TabernacleBönehus
- Johnson ChapelBönehus
- Junction City Church-NazareneBönehus · 1737 West 1st Avenue
- Junction City First Unided Methodist ChurchMetodister och helgelserörelsen · Kyrka
- Kingdom HallÖvriga restorationister · Bönehus
- McDonald ChurchBönehus
- Pentecostal ChurchPingstvänner och karismatiker · Bönehus
- Perryville United Methodist ChurchMetodister och helgelserörelsen · Kyrka
- Piedmont ChurchBönehus
- Saint Helen Catholic ChurchKatoliker (latinsk rit) · Kyrka · 1350 West 6th Avenue
- Saint Mary Catholic ChurchKatoliker (latinsk rit) · Bönehus
- Seventh Day Adventist ChurchAdventister · Bönehus · 645 West 3rd Avenue
- St. Michael Catholic ChurchKatoliker (latinsk rit) · Bönehus · 324 Main Street
- St Paul's Lutheran ChurchLutheraner · Bönehus · 1225 Main Street
- The Church of Jesus Christ of Latter-day SaintsÖvriga restorationister · Bönehus · 1530 Rose Street
- Valley Grove ChurchBönehus
- Wesleyan ChurchBönehus
- Willow Grove ChapelBönehus